YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24371880, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANINLLPWR EEAREKQKRD YIGILAAVFL GSGILVYVAL SLLEIMTDEQ RERNAYLQSE  60
   61 VQQLETQIAE IKKITERKKD IERRTEIILN LQQSRNLPTH VLDELVRIVP PGIYLSSLEK 120
  121 KGSLLLIEGR SESNNNVANM MRKVKASEWL TDPNMQSIVT QDDELRQLQR FSLRVSIKGA 180
  181 IAEEPAKPAK GASK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.98
Transmembrane Helix	21	43	0.93
Non-Cytoplasmic	44	194	0.99