YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SO0050
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEYIEFFKA HTLLSLAWVG LFVMLVVSVI KSSFSKIKNV THQELTIMVN RQDAKVVDVR  60
   61 SNDDFRKGHI VGAVNVTLAD IKNNQVSALE KFKGSPIILV CNAGMTSSQA AQLLSKQGFE 120
  121 NLYNLKGGMG EWQAANMPVS KSKR

Type	Start	End	Confidence
Cytoplasmic	1	7	0.42
Transmembrane Helix	8	30	0.79
Non-Cytoplasmic	31	144	0.51