YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24115285, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVNSFNEGV VSPLLSFWRR SLMLAGALFL TACSHNSSLP PFTASGFAED QGAVRIWRKD  60
   61 SGDNVHLLAV FSPWRSGDTT TREYRWQGDN LTLININVYS KPPVNIRARF DDRGDLSFMQ 120
  121 RESDGEKQQL SNDQIDLYRY RADQIRQISD ALRQGRVVLR QGRWHAMEQT VTTCEGQTIK 180
  181 PDLDSQAIAH IERRQSRSSV DVSVAWLEAP EGSQLLLVAN SDFCRWQPNE KTF

Type	Start	End	Confidence
Signal Peptide	1	34	0.86
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	233	0.97