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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24053408, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMKRHLNTC YRLVWNHITG AFVVASELAR AQGKRGGVAV ALSLAAVTSL PVLAADIVVH  60
   61 PGETVNGGTL VNHDNQFVSG TADGVTVSTG LELGPDSDEN TGGQWIKAGG TGRNTTVTAN 120
  121 GRQIVQAGGT ASDTVIRDGG GQSLNGLAVN TTLDNRGEQW VHGGGKAAGT IINQDGYQTI 180
  181 KHGGLATGTI VNTGAEGGPE SENVSSGQMV GGTAESTTIN KNGRQVIWSS GMARDTLIYA 240
  241 GGDQTVHGEA HNTRLEGGNQ YVHNGGTATE TLINRDGWQV IKEGGTAAHT TINQKGKLQV 300
  301 NAGGKASDVT QNTGGALVTS TAATVTGTNR LGAFSVVEGK ADNVVLENGG RLDVLTGHTA 360
  361 TNTRVDDGGT LDVRNGGTAT TVSMGNGGVL LADSGAAVSG TRSDGKAFSI GGGQADALML 420
  421 EKGSSFTLNA GDTATDTTVN GGLFTARGGT LAGTTTLNNG AILTLSGKTV NNDTLTIREG 480
  481 DALLQGGALT GNGSVEKSGS GTLTVSNTTL TQKAVNLNEG TLTLNDSTVT TDVIAQRGTA 540
  541 LKLTGSTVLN GAIDPTNVTL ASGATWNIPD NATVQSVVDD LSHAGQIHFT STRTGKFVPA 600
  601 TLKVKNLNGQ NGTISLRVRP DMAQNNADRL VIDGGRATGK TILNLVNAGN SASGLATSGK 660
  661 GIQVVEAING ATTEEGAFIQ GNKLQAGAFN YSLNRDSDES WYLRSENAYR AEVPLYASML 720
  721 TQAMDYDRIL AGSRSHQTGV SGENNSVRLS IQGGHLGHDN NGGIARGATP ESSGSYGFVR 780
  781 LEGDLLRTEV AGMSVTAGVY GAAGHSSVDV KDDDGSRAGT VRDDAGSLGG YLNLIHNASG 840
  841 LWADIVAQGT RHSMKASSDN NDFRVRGWGW LGSLETGLPF SITDNLMLEP QLQYTWQGLS 900
  901 LDDGQDNASY VKFGHGSAQH VRAGFRLGSH HDMNFGKGTS SRDTLRGSAK HSVRELPVNW 960
  961 WVQPSVIRTF SSRGDMSMGT AAAGSNMTFS PSQNGTSLDL QAGLEARVRE NITLGVQASY1020
 1021 AHSINGSSAE GYNSQATLNV TF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle