YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|237706951, gi...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHAALCQDI DADFMSRTTM NKFLFAAALI VSGLLVGCNQ LTQYTITEQE INQSLAKHNN  60
   61 FSKDIGLPGV ADAHIVLTNL TSQIGREEPN KVTLTGDANL DMNSLFGSQK ATMKLKLKAL 120
  121 PVFDKEKGAI FLKEMEVVDA TVQPEKMQTV MQTLLPYLNQ ALRNYFNQQP AYVLREDGSQ 180
  181 GEAMAKKLAK GIEVKPGEIV IPFTD

Type	Start	End	Confidence
Cytoplasmic	1	22	0.80
Transmembrane Helix	23	44	0.80
Non-Cytoplasmic	45	205	0.95