YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24111905, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKFIFVLLT LLLVSPFSFA MKGIIWQPQN RDSQVTDTQW QGLMSQLRFQ GFDTLVLQWT  60
   61 RYGDAFTQPE QRTLLFKRAA AAQQTGLKLI VGLNADPEFF MHQKQSPAAL ESYLNRLLAA 120
  121 DLQQARLWSA APGITPDGWY ISAEIDDLNW RSEAARQPLL TWLNNAQRLI SDVSAKPVYI 180
  181 SSFFAGNMSP DGYRQLLEQV KATGVNVWVQ DGSGVDKLTA EQRERYLQAS ADCQSSAPAS 240
  241 GIVYELFVAG KGKTFTAKPK PDAEIASLLA KRSSCGKDML YFSLRYLPVA HGILEY

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	296	0.99