YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|161619906, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTIHFDKIT LIGIGLIGSS LARVIRREGL ATHIAIATRS AETLKRAEEL NLGDSYTTNS  60
   61 AEAVKDADLV IVSVPVGSSG TVARQIAGNL KPGAIVTDVG STKASVIAQM QPELPENVHF 120
  121 IPGHPLAGTE YSGPDAGFAE LFTNRWCILT PLPDTDEKAL EKLTAFWTAC GSRLDHMDPQ 180
  181 HHDLVLAIVS HLPHIIAYNI VGTASDLELV TKSEVIKYSA SGFRDFTRLA ASDPTMWRDV 240
  241 CLHNKDAILE MLGRFSEDLA SLQRSIRWGD GEALFDLFTR TRAVRRGIID AGQEVDAPDF 300
  301 GRQAAVRSTA PLKAPEGDPA E

Type	Start	End	Confidence
Signal Peptide	1	22	0.75
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	321	0.97