YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82700263
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLASSTIL ALGAFLLCAC TTVDYDFSDV KKSRSSVARI TPPSGPVKAP RFGDRDPHEW  60
   61 TGKTPWHYPI HGTDVSKYQS DVDWSAVRAS GISFAFIKAT EGGDRVDERF NEHWSGTREA 120
  121 RLPRGAYHFY YFCRPAIEQA RWYIQNVPRE QSALPPVLDM EWNPHSPTCK LRPNAAVVRR 180
  181 EMRTFLQAVE KHYGKRPVIY TTVDFFDDND LRQLSEYPFW LRSVAGHPDE KYGPHPWTFW 240
  241 QYTGTGSIPG IRGDADINTF AGDSASWKKW LESNKVR

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	277	0.99