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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23348192, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVFGKAGD GGFVVRARGV DLSYGATRAL RNVDLDVPAG GMVGLIGPDG VGKSSLLSLI  60
   61 AGARTIQQGH VEVLGGDIAD KRHRQSAYPR IAYMPQGLGK NLYPTLSVFE NIDFFGRLFG 120
  121 HDRAERERRI ADLLARTGMS AFANRPAGKL SGGMKQKTSL CCSLIHDPDL VILDEPTTGV 180
  181 DPLSRRQFWE LIDDIRKDRP GMSVIVATAY MEEAERFDWL VAMNDGQILA TGTPQELLER 240
  241 TDTPNLDAAF IALLPEEQRR GHREIHIPPR APASDTAIAI EAEHVTVRFG DFTAVDNVSF 300
  301 RIPRGEIFGF LGSNGCGKTT TMKVLTGLLP ASEGTARLFG REVDPKDIDI RRHVGYMSQA 360
  361 FSLYSELTVH QNLELHARLF GMEPDVTARR IKELTARFDL ADVMDELPDA MPLGIRQRLS 420
  421 LAVALIHSPD ILILDEPTSG VDPVARDAFW QILADLSRRD NVTIFVSTHF MNEAELCDRI 480
  481 SLMHAGKVLI SDTPKAITES RNAATLEDAF VAFLQDAIGE GEQSAPQKIE KDSAEPKAQH 540
  541 RKAWPSWLPN LRRMFAYTRR EALELKRDPI RATLAILGSV ILMFVIGYGI NLDVEKLTFA 600
  601 VLDRDDTTIS REYTQQIAGS RYFIEKPPIT DYDDLDRRMR EGEISLAIEI PPNFAANVMR 660
  661 GRQVEVAAWI DGAMPTRAET AKGYVQGVHA NWLTQKARAL YGDAATAGNF NLEIRYRYNP 720
  721 DVQSLVAMVP AVIPLLLLMI PAMLAVLSVV REKELGSIIN FYVTPVTKFE FLLGKQLPYI 780
  781 GLAFLNFLML TAFAVFIFRV PFTGSFVTYA TAALLYVIIT TSMGLVISTF MNSQIAAIFG 840
  841 TALMTLIPAV QYSGIIDPVS ALQGVGAFIG KIYPTTYFVT ISRGTFSKAL DFSALAGSFL 900
  901 PLLIAIPVLM LLGIVLLKKQ AS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle