YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82699548
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSSKNETK KSGGLGETIS VIVQALLLAL IIRTLLFQPF SIPSGSMRPT LLEGDYLFVS  60
   61 KYAYGYSRYS LPFGLDLFSG RIWSAEPKRG DVVVFKLPSD TSVDYIKRVI GLPGDRVQMR 120
  121 GGVLYINDKP VKRERVGTIN NPDVTEENRP VEVYRETLPN GVTYDTLELA PNSIGDDTRV 180
  181 FEVPAGHYFM MGDNRDNSLD SRFGVGYVPF ENLVGRANII FFSIADKASP LEIWKWPTDV 240
  241 RFNRLFTWVS GEPHTAVTGN

Type	Start	End	Confidence
Cytoplasmic	1	13	0.90
Transmembrane Helix	14	37	0.81
Non-Cytoplasmic	38	260	0.94