YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4688668
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVNPTRPEG GRHHVVVIGS GFGGLFAAKN LAKADVDVTL IDRTNHHLFQ PLLYQVATGI  60
   61 LSSGEIAPST RQILGSQENV NVIKGEVTDI NVESQTVTAS LGEFTRVFEY DSLVVGAGAG 120
  121 QSYFGNDHFA EFAPGMKSID DALEIRARII GAFERAEICE DPAERERLLT FVVVGAGPTG 180
  181 VELAGQLAEM AHRTLAGEYK NFNTNSAKII LLDGAPQVLP PFGKRLGRNA QRTLEKMGVN 240
  241 VRLNAMVTNV DATSVTYKTK DGEEHTIESF CKIWSAGVAA SPLGKLVAEQ TGVETDRAGR 300
  301 VMVNDDLSVG DQKNVFVVGD MMNYNNLPGV AQVAIQSGEY VAEQIEAEVE GRSNTEREAF 360
  361 DYFDKGSMAT ISRFSAVVKM GKVEVTGFIG WVLWLAVHIM FLVGFRNRFV SAISWGLNAL 420
  421 SRKRWNLATT RQQLHSRTTL SKFAHELEEA SSDLPIELRD NQRFSGK

Type	Start	End	Confidence
Non-Cytoplasmic	1	384	0.70
Transmembrane Helix	385	405	0.75
Cytoplasmic	406	467	0.56