YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPF_CORGL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSIYNLAQ ADALPLESGN SILFPPLYDI VWSLIPFLII LIVFWKLVLP KFQEVLTERE  60
   61 DRIKGGIQRA EAAQAEAKAA LEKYNAQLAE ARTEAAEIRE QARERGKQIE AELKDKANEE 120
  121 SNRIIESGSK QLLAQREQVV NELRREMGQN SINLAEHLLG DQLSDNVKRS GTIDRFLADL 180
  181 DTVAPNGK

Type	Start	End	Confidence
Non-Cytoplasmic	1	27	0.74
Transmembrane Helix	28	49	0.89
Cytoplasmic	50	188	0.75