YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19552200, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQKKTHKG LVPVSSRERA SESVSATRAP FRLGAVGIGA IALVVLLILF VIAIPVRNYF  60
   61 QLRSDIAQTE ASIEAKEQQI KQLESDLNRY QSEAYIREQA RLRLGVIEPG ETAFRIVDPA 120
  121 LDTDTSVTSD GNEEKPLGAW YENLWDSVTK PEALGEEEIA PPAVEGEVPT LAPTEEATVQ 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	32	0.85
Transmembrane Helix	33	54	0.95
Non-Cytoplasmic	55	180	0.88