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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23100760, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGERQREQVS QPKKKRRIRT KKILLGGLGS IFLLALIAFL FVNGYINKSL PQTEGTMELP  60
   61 MLDNEVTVIT DEDGVPHIQA ETARDMYIAQ GYIQADRRMF QMELSRRQAS GTLSEVVGED 120
  121 ALNQDKYFRT LGLRRAAEKS YEVYSEESVE VLEWFSTGVN AYMEEAKANN SLPVEFTLMD 180
  181 FEPEEWTPVD SLTIGKFMAF DLGGHWQQQA FNYYLLDNYE QEKAYELFPS YPENKPTIIQ 240
  241 DEEIDIAASF EHAVIPHPFN GSNNWVVSGD KTASGMPLLA DDPHLGLATP SIWLQMHLES 300
  301 GDGLNVSGVI FAGVPGIILG HNEQIAWGVT NTGPDVQQLY IEQRNPDNPH EFLFEDEWEE 360
  361 ATVMEEPIKV KDGETVDYEV VETRHGPIVS EFASESGKDT VLSLRWTALD ASTELEAIME 420
  421 MNRATGWEEF EQGLEKFLVP AQNFVFASND GTIAYKANGK IPIYEDGQDA LLPLNGWEAE 480
  481 SEWQGYIPYD ELPTVINPEK GFIATANNQI APDSYPYHIS NVWAQPYRYE RIAEVLESGD 540
  541 NFTAEDMQDL QMDQTDLRAR EFVPIFQKVL EDTELTEQEK EALDALSEWD FVADKDAPQP 600
  601 LIFEHWMQAI QSTIYQQEIP QVMRELFSTQ SQSTENVLRK AASGQKSQWI EDKGGIEVVL 660
  661 HDALENTMEK LTETYGEDLS AWKWGDYHQV QFHHPLSSVS PLLAFFLNNE DAIPVGGSGV 720
  721 TPMATSYDKE TGEVDHGASW RFVIDTSDMQ SGYHIVGPGQ DGHFRSDWYH DQMNDWVEGN 780
  781 FHETRLDGAE GEELVLEPGE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle