YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23100612, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIMRSLSA ILIVSIVLLI MINRLNAAQG FSGDNTLTVY NWGDYIDEEL ITLFEEETGI  60
   61 TIVYETFDSN EAMMTKIQQG GTTYDVAVPS EYMVQKMVEE DLLIELDHSK LPNLSNIDER 120
  121 FMDLPFDPNN QYSIPYFWGT VGIIFNTNLL PEGMELTGWH DLWDPALENQ ILLIDGAREI 180
  181 IGMGLNSLGY SLNDTNPEHL YQALEKLEEL TPNVRAIVGD ENKMLMANNE ATIAIGWSGD 240
  241 AADIMGENEA IDYLVPEEGS NLWFDNFVIP KTARNIDGAH QFINFMLDAE IAAQNTEYVS 300
  301 YSTPNKEALQ FMPEEMVEDE RFYPDPELTD RLEVYENLGQ RNLAFYNELF LQFKMYRK

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	358	0.99