YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22778541, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLVAPITIF TISLQLSNNE TGKAMNNMFF GEKLKKEREK RGWSQDYLAE KVYVSRQSVS  60
   61 KWETGKNYPS IEVIINLSDL FDITIDELLR SDEELKEKVI RDSKQLAYPK WKTFFDSMFL 120
  121 LGAFLLLVKL IILGVNYFAG TEFLVTDGKL LKIIANFLPL ALMIIGGIGS DSLKNKYIN

Type	Start	End	Confidence
Cytoplasmic	1	113	0.96
Transmembrane Helix	114	139	0.81
Non-Cytoplasmic	140	149	0.88
Transmembrane Helix	150	170	0.88
Cytoplasmic	171	179	0.78