YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22777509, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINWIWISMA VIGIVYAMFS GNMEEVNQAI FESAGDAVTL SIGLISILVF WLGMMRIAKE  60
   61 AGLLDLLAKV FRPIVVRIFP DIPKDHPAIG YILSNMTANM FGLGNAATPI GIKAMEEMKK 120
  121 LNKDSDTASR SMITFLTLNT TGLTIVPTTV IGIRMQYESA SPTEIVSATI MATIIATTAG 180
  181 LMIDRFYHYK STWGKN

Type	Start	End	Confidence
Cytoplasmic	1	4	0.49
Transmembrane Helix	5	23	0.89
Non-Cytoplasmic	24	32	0.47
Transmembrane Helix	33	54	0.88
Cytoplasmic	55	131	0.56
Transmembrane Helix	132	153	0.89
Non-Cytoplasmic	154	164	0.77
Transmembrane Helix	165	187	0.87
Cytoplasmic	188	196	0.90