YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23099229, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKGKGMKFV GDSRISAERK PNVPKDYSEY PGRTEAFWPN FLLKEWLAGA VFLVGFLCLT  60
   61 LAHPSPLEGV ADPTDAAYIP LPDWYFLFLY ELLKYEFASG DWTLMGILVL PGIAFGALLL 120
  121 APFLDTGPGR RPRQRPIAVG MMLVGLASVI WLTYTSAAVV DWEGRAEANK PVPESEVSID 180
  181 TEHPGYAAYE NSCLSCHGGE LEGGAGPTLV GIDYSKEEIM TIATDGIGSM PADQFQGSEE 240
  241 ELEQLAEFII SVNEETE

Type	Start	End	Confidence
Cytoplasmic	1	41	0.97
Transmembrane Helix	42	63	0.88
Non-Cytoplasmic	64	101	0.89
Transmembrane Helix	102	124	0.90
Cytoplasmic	125	136	0.80
Transmembrane Helix	137	155	0.93
Non-Cytoplasmic	156	257	0.89