YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23099077, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLPNKLTFS RILMIPIFIL LLSIPFPWGA WDIGNSELPV AHFLAALIFI IAAATDWVDG  60
   61 YYARKYQLVT NLGKFMDPLA DKLLVSAALI LLVEMEIAPA WIVIIIISRE LAVTGLRLVA 120
  121 AGEGIVLAAG SMGKLKTATQ MISIAVLLLH NFPFSYIDFP FGIIMLYIAL IFTIISGVDY 180
  181 FIKNWHVMRD SK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.88
Transmembrane Helix	9	31	0.88
Non-Cytoplasmic	32	39	0.84
Transmembrane Helix	40	62	0.88
Cytoplasmic	63	82	0.86
Transmembrane Helix	83	105	0.85
Non-Cytoplasmic	106	112	0.60
Transmembrane Helix	113	130	0.71
Cytoplasmic	131	136	0.54
Transmembrane Helix	137	154	0.64
Non-Cytoplasmic	155	162	0.58
Transmembrane Helix	163	182	0.93
Cytoplasmic	183	192	0.82