YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22777154, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKNVVSIE DRIPKLKHAR KKKANRRLIF YLSIFFLLIA VVVYLQSPLS HIRTIEVNGN  60
   61 TFLNEEKIIK YSELTTDTNI WTINTNSVEQ AIAKDPVIKN IQVDRKFPST VTLEVEEQPV 120
  121 IGYINDDSNY LPILGNGEIL DDSNQGFTGN APFLQGFDEE QLKQLATEMK DVPQSIMSLI 180
  181 SEIHWVESED DSNKIMLYMN DGYTVIGSLR EISNKISVYP SIVSQLEPED EGVIHIGVGV 240
  241 YFESYQDDQD VTELEVDETS GNDSEDGSEE D

Type	Start	End	Confidence
Cytoplasmic	1	27	0.96
Transmembrane Helix	28	45	0.98
Non-Cytoplasmic	46	271	0.99