YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23098756, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISSIFRKV GKFIFTCSWI VLITFLAIAL VSKANGDDGS ILGYQVKSVL SGSMEPGIQT  60
   61 GSIIVIDTKA NPADYQRGDI VTFTGEEGML ITHRIQEVQN SGTQFITKGD ANNGPDVSPI 120
  121 PVSNIVGEYS GITIPFVGYV LHFATTAQGA ALLFILPGIL LVSYSIITIR KALKEVKQLV 180
  181 EKKTA

Type	Start	End	Confidence
Cytoplasmic	1	9	0.82
Transmembrane Helix	10	32	0.75
Non-Cytoplasmic	33	143	0.97
Transmembrane Helix	144	167	0.85
Cytoplasmic	168	185	0.92