YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22776480, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMWRSMKKLT SGLITTVLSM LLIVTVFTVI LQQATDGTPN VFGYQLKTVL SGSMEPEFQT  60
   61 GSIISIHPQE DTTQFQKGDI ITFQNSDGMV ITHRVEEVKN NGEQYVTKGD NNNRADSELV 120
  121 VADSILGQYT GFTIPYVGYA TQFANSEEGA LFLLIIPGVM LVGYSIINIG RALRQVETSS 180
  181 KEKTEVSNHQ

Type	Start	End	Confidence
Cytoplasmic	1	11	0.69
Transmembrane Helix	12	31	0.77
Non-Cytoplasmic	32	148	0.97
Transmembrane Helix	149	170	0.83
Cytoplasmic	171	190	0.84