YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22776153, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVPCALTI AGTDPSGGAG IQADLKTFQE LQTYGMSVIT SVVAQNTTGV TSVHHMPINM  60
   61 IEDQLEAILE DMPIHAFKTG MIANKQMMEI ISKKIEKLNA PYVMDPVMVA TSGDSLIDKE 120
  121 ARSFLRESLL PQTALVTPNI PEAEFITGNS IETVEDMKDA AKHIVDHFHA DAALIKGGHM 180
  181 EGEAIDFLYD GSKIHTFSAE RINTKNTHGT GCTYSAAITS YLAKGYSIVE AVRHSKDFVT 240
  241 VAISKSFELG NGNGPTNHWA TRER

Type	Start	End	Confidence
Signal Peptide	1	23	0.76
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	264	0.99