YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23097697, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNKLLNNL EEYSAVISLL IASLLVFLQV VLRYVFNISL VWSEEVSRYI IIWFVLVGSS  60
   61 IAVREKAHAT VDAVVTYLPY ILKRICSIFA SFIGMTFSVI LIWSGSVTVS NVIEFGNVTP 120
  121 AVGIPMSIPY LALPVGGLLM FIRFLQLLIQ DVTNMRKNDP NKKPPIIEGG IKE

Type	Start	End	Confidence
Cytoplasmic	1	12	0.93
Transmembrane Helix	13	36	0.86
Non-Cytoplasmic	37	45	0.88
Transmembrane Helix	46	64	0.88
Cytoplasmic	65	84	0.85
Transmembrane Helix	85	105	0.93
Non-Cytoplasmic	106	125	0.82
Transmembrane Helix	126	147	0.88
Cytoplasmic	148	173	0.98