YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23097653, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTRILVGFL WKTFWLGGLA GLIASFFVKP EQYLNYLQPF DGMEILGLIL FFLVLGLTFA  60
   61 MVSLTGFFAY LFVHRMGLNL FKGYWSTVQI ALIIFILFDI IYFPYQSANN VALYWFILLA 120
  121 AAILLIGWIV AKLKSKETNK KAFVPTLFFM VVFTTVEWVP GLMVDGTDYA WLMVVPLLVS 180
  181 NTYQILNLHR LNFQEKTPVQ EAKQKKKK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.97
Transmembrane Helix	8	28	0.93
Non-Cytoplasmic	29	47	0.90
Transmembrane Helix	48	72	0.93
Cytoplasmic	73	82	0.85
Transmembrane Helix	83	103	0.94
Non-Cytoplasmic	104	110	0.89
Transmembrane Helix	111	131	0.95
Cytoplasmic	132	141	0.91
Transmembrane Helix	142	162	0.92
Non-Cytoplasmic	163	168	0.84
Transmembrane Helix	169	188	0.83
Cytoplasmic	189	208	0.84