YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23097524, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSVQFITM ISMVLSGFYL GIIQQTFRRL TTYWRDNAFL TYFLEIGFWL TQAGVIFYVL  60
   61 YHVNAGEVRL YVLLACLLGF SIYQVFAKKP YIRMLEVIIR IVSSIYHFIR RLFDKLLLSP 120
  121 LKWIITLIYR MIKTIFGWII TLLLFILNVI LAPFIWIGKG IYKLIPDSFK KFLKKIAGFY 180
  181 SKIKNICYRW LQLFRRR

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.77
Transmembrane Helix	7	27	0.89
Cytoplasmic	28	38	0.83
Transmembrane Helix	39	61	0.92
Non-Cytoplasmic	62	67	0.80
Transmembrane Helix	68	87	0.93
Cytoplasmic	88	133	0.64
Transmembrane Helix	134	157	0.89
Non-Cytoplasmic	158	197	0.52