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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22537074, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTNNVSDT NTRFAKEELE EVFEELGTTQ GGLSDEEVAV RQKKYGLNLL SEVKQESIIL  60
   61 LFLKNFTSLM AILLWVGGFV AIVSNSLELG LAIWMVNVIN GIFSFIQEYR ASQATQALEK 120
  121 MLPSYSRVLR KGSEEKILSE QLVPGDIVLI EEGDRISADG RLIKTTDLQV NQSALTGESN 180
  181 PIYKDSNVEN DQSKTLIECD NMVFAGTTVS SGSATMVVTA IGMQTQFGQI ADLTQGMKSE 240
  241 KSPLQRELDR LTKQISIISI TVGIIFFLAA TFFVKEPVSK SFIFALGMIV AFIPEGLLPT 300
  301 VTLSLAMAVQ RMAKEHALVK KLSSVETLGA TSVICSDKTG TLTQNEMTVN HLWQNGKSYQ 360
  361 VTGLGYAPEG QILFEGDNIC FGNSDRGDLE KLIRFAHLCS NAQVLPPNDD RSTYTVLGDP 420
  421 TEACLNVLLE KSGINIQENR KFAPRLKELP FDSVRKRMTT IHSLGGDEKD KKISITKGAP 480
  481 KEILDLSDYV LSDGKVIPLN KEERNKIQLA NDTFAKDGLR VLAVSYCDIE GFSKEQWTQE 540
  541 NLEQHMVFIG LIAMSDPPRE GVREAIDKCH AASIRIIMVT GDYGLTALSI AKNIGIIRND 600
  601 DAKVISGLEL SEMTDSQLKK ELSGEVVFAR VAPEQKYRVV TILQEMGEVV AVTGDGVNDA 660
  661 PALKKSDIGV AMGVTGTDVA KESADMILTD DHFASIVHAV EEGRAVYQNI KKFLTYIFNS 720
  721 NTPEAVPSAF FLFSKGFIPL PLTVMQILAV DLGTDMLPAL GLGVEPPETD VMNRPPRRLT 780
  781 DRLLDKGLLI KSFLWYGTIE SVLAMGGFFW AHYLRYGNFT FFVANGIPYR EATTMTLGAI 840
  841 IFSQIGMVMN SRTSYQSIKA LSIFGNKLIN FGIIMEILAF LVLVYVPLFH NLFNTASLGL 900
  901 SHWLYLISCP FIMIGLDEVR KLFSSRKNKR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle