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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22295385, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTVTAPVS VVPSAGHRRY DPEAIARYYW RHPWQVIWRF VDISVSFLTF WLLLQWDKWL  60
   61 GQQDTQRPLR AMQLRKLLIR LGPTFIKIGQ ALSTRPDLIC PDYLEELTLL QDKLPPFANE 120
  121 IAIAIIERDL HLNLGDIFAE FSPQPVAAAS LGQVYRAKLH SGEEVAVKVQ RPNLLPVITR 180
  181 DLFLIRLLVQ WVKPWLSINL CHDLRDIVDE FGHKLYEEID YLNEGRNAEK FAANFRDDPT 240
  241 VKVPKIYWEY TTEHVLTLEW IHGIKLTRTD CMLAAGVNPD ELIRIGVISG LRQLLEFGFF 300
  301 HADPHPGNLF ATPDGRIAYI DFGMMDQLEE STKESLVDAV VHLVNKDYQA LGTDFVKLGF 360
  361 LTPETDMRPI IPALESVFEE VIGSSVREFN FKVITDRFSQ LMYTYPFRVP AKFALIIRSL 420
  421 VTQEGIALCL NPNFRIVDVS YPYVARRLLQ GESPQLRRRL LDVLFKDGRL QWQRLENLIA 480
  481 IARQDQHFNL APTATLGLQY LFSEEGQYLR RQIVLALTED DRLHTEEVQR LWNLVKSDLR 540
  541 PLFLIDVAWE ALKASVAHTL GKEEDSNSLV VAP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle