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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22299177, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVKDGLRYW PLGMAFLLGV GLQPVRAAEM FLPPTGLAQE ELIALTEVDS LAQARLPQSE  60
   61 GSAIDLLPLP PQPTAAVDPP REAPASLPTT IEVKGDSPAP PVEPSPPTTD NSPGVPTTPQ 120
  121 LAAEQAVQEA RLALLREGDR YWQLGDLTTA RTYYQKAKAD LNVPPPHVIP PAVLEISQLP 180
  181 PAAQVYWREV QSGSQLYTAQ AVPLQLLVEQ FPEFIPAQVR FGEFLAQQGS LKEACAHLEK 240
  241 AASLYPDQPD IQRGLITLYD RQQQWLEAAL AAQRFALLNP DHPATPEFEQ LAAERMQRFR 300
  301 RRLQGQLREG MVVGALTGLV GVALTGNPLL SLDSIQMMTL MMQGESALGR SAARNISRQV 360
  361 KLLEDAAVQT YVNEVGQRLA KVAGRNEFAY EFFVIKDNDL NAFALPGGKI FVNSGAILKA 420
  421 STEAELAGLL AHEIAHTVLS HGFRLMTQGT ATANLTRLLP AGGYVTGIVV TSYSREMERE 480
  481 ADILGTQILA RAGYAADGLL NLMHTLKKEY RNQEPPLPWF STHPPTNERI RYIRGLMRDR 540
  541 GYTPFAFEGL ERHQRIQAHL RTLVDPPNAP KSKRETAKTP Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle