YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22294182, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNWHKISLG LNPLGAIGVF DSGVGGLTVL QALQSRLPQE SFLYFGDTAR LPYGTRRRSE  60
   61 ILQYVREILR WMHAQGVKMA VMACNTSSAL ALTQVRSEFC FPILGLIVPT AKIAVTLGKR 120
  121 IGVIATPATV KSGAYARALQ EFSPTVAIAQ VACPEFVPLV ESNCLEGDRV HRIVRQTLSP 180
  181 LVEFDPDVLI YGCTHYPHLR HVIEQYVPTT VHHLDPAHAV ARAAVRKLEA MNLATPCPQG 240
  241 QVQFYVSGIP EQFAQLASQW LGYYPTVEHL PLSVLTQCDS PLGITVPPPK PSAVVAS

Type	Start	End	Confidence
Cytoplasmic	1	8	0.80
Transmembrane Helix	9	32	0.77
Non-Cytoplasmic	33	297	0.94