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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22297595, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLGLTPKFV KIFLFVGLML LSTSLAVIFP LNSVEGLGSG VTKTVLDNGL TVLIKEIPTA  60
   61 PVVSLQVWYR VGSRHEPKGE NGIAHQLEHL MFKGTQSRPV QFGQLFYALG SSSNAFTSYD 120
  121 MTAYHHTVRA DQLEPLLILE ADRLRHTLIT PDALESEKRV VISELQGYEN SPEYRLSRAV 180
  181 MAALYPKHPY GLPVGGTASD VEQLTLAAVK SFYQQYYRPD NAVVVIAGNV RAARALELVK 240
  241 STFGAIPQPP EPLISPPLPP PGAVSGQRIR LREPGSAPLL QILVPIPGIT HPDQAALDVL 300
  301 DMLLSGGRSS YFYQELMETG QASSAYSYVA ALQEGGWFEM GAIASPDQSL ETIEQSIGKM 360
  361 LQQLAERPLS LAELQRAKQQ LKANFILRNR DIDAQASQLA NDETLTGDYR FSDRHLAAIE 420
  421 KVTAADVQRV VQTYFGRDRW IVGEFIPSEF ADVELSGRPA VQTTAHNLIG EPVDPQTIAA 480
  481 YLPQGSAQAA PAVKNNGVET FTLENGLRVL LLVDRSTPTV TLAGRIDAGT AYDLLTQPGV 540
  541 ANLTAANLLN GTRTKTALTL AQTLEDRGIS LEFSAFRDGV DVEGYALASE LPTLLATLGE 600
  601 VLQEATFPEA EFKLSQQRYL TALGLEADDP VRWGRRVLQE TLYPAHHPLH PFATPESVQA 660
  661 IQRQDLLNFY RAAYRPDRTI LTLVGDFDPL AVRSRLKDIF GPWQPPTAPL SLTFPAVSPP 720
  721 PQTLFRNAVI AGKSQAITYL GTPGIDRRHP RFYAAMLMNH ILGGDTLASR LGTEIRDRQG 780
  781 LTYGIYSFFT ASRQAGPFMI QLQTAPEDTA KAIQATLQLL REARRQGFTA AELEAAKRSL 840
  841 SNTYLVELAN VDVVARTLLA NASVDLPPQE LQQFSDRLQQ VSLAEVNQAL RELIDPERLV 900
  901 IVTAGPAVSF SP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle