YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21960466, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLILRTVLA VLYCFLVCVF GSIYCLFSPR NPRHVATFSH LFGRMFVLFG ITIEQRIPAE  60
   61 AAKYGNCIYI ANHQNNYDMV TMSNVVQPGT VTVGKKSLLW VPLFGPLYWL TGNLLIDRDN 120
  121 RAKAHSTIAQ VVEQVQKRNI SIWMFPEGTR SRGRGLLPFK TGAFHAAIAA GVPIVPICVS 180
  181 STNGIKLNRW SNGKVIIEML PPIDTSGYTK ERVRELSEHC RNLMLAKIEQ LDAEVAQQSV 240
  241 AKK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.39
Transmembrane Helix	8	26	0.57
Non-Cytoplasmic	27	243	0.60