YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21959886, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSFRDVLL IKLREKKMKK CSIILASVLL ATSINAIADT PTPLNQQQPL EKIAPYPQAE  60
   61 KGMSRQVIFL EPQKDESRFK VELLIGKTLN VDCNRHMLGG NLETRTLSGW GFDYLVMDKI 120
  121 SQPASTMMAC PEDSKPQVKF VTANLGDAAM QRYNSRLPIV VYVPQGVEVK YRIWEAGEDI 180
  181 RSAQVK

Type	Start	End	Confidence
Signal Peptide	1	38	0.94
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	186	0.99