YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22125816, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGCRYYVR YLANELAPMK GYLWGGASVV LVTVAQLVLK WGMMNIPLLS LADINVQFLT  60
   61 MYFVQLASVM CGLMGYALSM LCWFFALRYL PLNRAYPLLS LSYALVYLGA VLLPWFNEPA 120
  121 TLLKTLGAGF ILLGIWLINI KPIKAS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	41	0.95
Non-Cytoplasmic	42	62	0.89
Transmembrane Helix	63	85	0.93
Cytoplasmic	86	94	0.81
Transmembrane Helix	95	115	0.92
Non-Cytoplasmic	116	120	0.82
Transmembrane Helix	121	140	0.94
Cytoplasmic	141	146	0.88