YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22125495, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLFISRVFM EFIRFVIDFI LNIDVHLAEL VAQYGIWVYA ILFLILFCET GLVVTPFLPG  60
   61 DSLLFVAGAL ASLPSNDLNV HTMVTLMVIA AILGDAINYT IGRIFGEKLF SNPDSKIFRR 120
  121 SYLDKTHQFY EKHGGKAIIL ARFVPIIRTF APFVAGMGKM SYRHFAAYNV IGALVWVLLF 180
  181 TYAGYLFGNV PIVQNNLKLL IVIIIVVSIL PGVFEVWRHR RAAVRQKNQ

Type	Start	End	Confidence
Cytoplasmic	1	35	0.73
Transmembrane Helix	36	58	0.89
Non-Cytoplasmic	59	79	0.69
Transmembrane Helix	80	101	0.88
Cytoplasmic	102	164	0.81
Transmembrane Helix	165	186	0.93
Non-Cytoplasmic	187	196	0.84
Transmembrane Helix	197	217	0.93
Cytoplasmic	218	229	0.94