YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229687951, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSVVGVKI SKTGNYTILF TVSTNPVARV FSVTDPISAY AGNIYDSRGV YDVIREFKRF  60
   61 SITATEYVGE NGRKYIHISG YAGLRRIITG TRYGASHPQM LSMGIGQQGL SSNIVKGLKF 120
  121 CILFSIGYRT IEGIFKDEYT LAEFIGNITM DMAKIAIVAA TSFIVGVLFT ATVLAGGSII 180
  181 VVAGVAFAVG FVATAILDHF DEKYGISEKL IALLTKEMRK KPRTQEANFQ SILNGLGRLK 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	152	0.94
Transmembrane Helix	153	174	0.84
Non-Cytoplasmic	175	178	0.61
Transmembrane Helix	179	200	0.85
Cytoplasmic	201	240	0.86