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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22125045, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNICSCQTA NCFNKSKGVF ITDPKLKALL NPQPSWGFSG HNNAPRIAGA LSDFSRNQMR  60
   61 IPTLMATKRL LQNILMALFL LALLVIGFRL WPHPPLSQGL PLSTAYYDRH GTLLRLSLAN 120
  121 DDRYRLWTPL EEISPLVIQG IQLHEDRGFY YHPGVNPISL LRGFWQSYVQ GGRQQGGSTL 180
  181 TMQLARMHWH LNTRSPTGKL RQIARAIQLE LSYSKHDILE AYLNYAPYGR NIESIAAASL 240
  241 IYFDKKPQQL TLPEALTLAV LPQSPSYRID PTTGVLGSAL TQARNRLFVR WQQTYPTDSS 300
  301 QMALFQLPLS LRQPEKMPYI APHFIEQIRR QNQQLANTQS QVDTTLDANL QQLVEKQVEA 360
  361 FIRRNNSRGI HNAAVLLLDT RDMGVRALVG SANYYDREIQ GQVNGTNAKR SPGSTLKPFI 420
  421 YALGLEQGIL HPMTILKDVP SSFGAYAPEN FDHRFLGPVT ATDALNFSRN IPAVYVASRL 480
  481 RQPTLYQFLR LSGVTNMASE NHYGLSLVLG GGEITLQELA RLYAMLANRG TLHPIQMVQT 540
  541 DKTLPSIRLL SEAASFITLD MLRQHRRPGD TLAQSPTSLP VYWKTGTSWG FRDAWSAGIF 600
  601 GPYVLIVWEG NFAGKGNSAF VGADAAAPLF FNIIDSIQAN YPALREPKHP WPPQLKRVAI 660
  661 CLASGNLPTP WCQQQGKTWF IPGKSPIKVD TVYRPVVIDI NSGQAACLPY DRSQTRTEVF 720
  721 EFWPSDLANV FAQAGLPKRQ PPDRSHCKEG NTLASGNAPR ITSPLRNTTY TLRQSQQGRD 780
  781 QIVFSATLDA DSTTTYWFVD DIYLGSSTSK KSIDWHPTRS GQYRIRAIDD HGRADSRLIR 840
  841 VEKVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle