YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229681230, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIISQQVNLM DEAKRRLRLS NPWHLLATGF GSGLSPWAPG TMGSIAAIPF WLLLIQLPWQ  60
   61 LYVLLVMFSI CIGIYICHRT AKDMQVHDHG SIVWDEFVGM WITLMALPVN SWQWVVAGFI 120
  121 AFRIFDIWKP WPIRWFDRNI HGGTGIMVDD IIAGVVAAAV IFVIGHYWPL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.91
Transmembrane Helix	21	41	0.86
Non-Cytoplasmic	42	57	0.67
Transmembrane Helix	58	78	0.92
Cytoplasmic	79	96	0.79
Transmembrane Helix	97	122	0.81
Non-Cytoplasmic	123	145	0.71
Transmembrane Helix	146	168	0.88
Cytoplasmic	169	170	0.69