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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21673401, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDFLRGIKL TILLIAAVFL FFTARLAWLQ IVQHDDISSR SGSIRRIWEQ APRGHFIDRN  60
   61 GITVLENQAL YTLKIIPNEL RASSIPYLAY LLEIPVDELN EKVAEAKDYS PFAVSTIYRD 120
  121 LNEFVVARIS ENLWRLPGVI IEIENKRKYS DLFRGTHLFG YLRNVSKEQL DTLAEKGYTP 180
  181 DDKIGFSGLE RIYEEELRGE KGVRYELVNP LGMLMGKYNE GKNDIPSVKG NDLYLTIDAH 240
  241 LQRLAENLLR ATGHPGAVVA IDPSDGGVLA LCSEPDFDLD ILNGKTRKKE WAEIALSPEK 300
  301 PLFNRAIQAV YPPGSTYKLV LAIAGLEEGV IKPEDTIIST GSWNYGGRIF HDHGGRGHGI 360
  361 VNMKKAIIES CNIYFYQLML KVGLDTWDKY GKMFGFGQRE GIDLPGERRG LLPTTEYYNR 420
  421 RYGEGRWTKG YLVSLGIGQG ELGVTPLQLA NYAATIANNG TWHQPHIVRG YRDTRTGIYV 480
  481 PIDHASRTLP ISKETFGIIK EAMQGVVQQG TGTLAQVPGV TVAGKTGTAQ NPHGKDHAWF 540
  541 ICFAPVDHPK IAIAVLVENA GFGGSISAPI AREMINYYLV EKNKPKTQGA DSTAVAKIKK 600
  601 LNDSLNTKRP AAKTAIDSTS TAPQSDLEGG D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle