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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|170709208, gi...
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLERFRKII GICLLVSLVF IGCFKPLRTF ISSPKQLVVF EGQQSEIASL PVFKASSTDR  60
   61 HVFTVSSNEQ KQGLMVNSHQ NGEADMVFQL AGFPVKKVNV RVLKDFKVIP GGQSIGVKLN 120
  121 TKGVLVVGHH LIQTEKGKVS PGETAGVQIG DMITEINGKT IERMSDVAPF IHNSGETGEP 180
  181 LNLVLLRDGK HIRTKLTPQK DNGESSYRIG LYIRDSAAGI GTMTFVHPDS MKYGALGHVI 240
  241 SDNDTKKPIQ VEDGQIMRST VTSIERGSHG NPGEKLARFS PDREVIGNIT INSPFGIFGK 300
  301 LNTNMTNGVM DKAMPIALSH QVKEGPAKIL TVIDQDKVEA FDIEVVSTVP QKFPATKGMV 360
  361 IKVTDKRLLA KTGGIVQGMS GSPIVQNGKV IGAVTHVFVN DPTSGYGVHI EWMLHEAGIN 420
  421 IYDQERKAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle