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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|65319943, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQEKKSGR AVTMRXNILF FCVFILFSAM IIQLGKVQII DGETYKNEVE KRENATVSLS  60
   61 VPRGKIFDRE GNPVVDNKSL RTITYTKMKG VKSEEILKTA RQLADIIEIP QEDIDKLTET 120
  121 DKKDFWMQLN PTLTEKLVSK KEINKFRDKD ITGKNLDKKI EELKRKRVTD KNLQDLTDKD 180
  181 IKVLAIKSKM TSGYQMAPQI IKKDVSEKEF TIISEGLANL PGVDVSVDWE RVYVNDGLFR 240
  241 SVLGNVSNSD EGLPSERLDY YLVRDYSRND RVGKSYIEQQ YEDVLHGTKK EVRSVADKQG 300
  301 TTIRTETISE GKSGKNLTLT IDMELQKKVE ESIEKILKAY KGSESMLDRA FVVMMNPKNG 360
  361 QVLSMAGKRL VEKDGKTEIE DYALGTMTSS YELGSTVKGA TVLTGFETKA ITPGTYFYDA 420
  421 PMKFKGTREK KSWKEFGNID DLRALQVSSN VYMFHTALKI AGVDYVRNSS LNIKQEYFDK 480
  481 MRYYFRQFGL GVPTGIDLPN ETAGQIGKKD NQPGFLLDYS IGQYDTYTPL QLVQYISTIA 540
  541 NGGYRMKPQI VQEVREQTSQ KDEIGKVVHA VEPIVLNKVD MKEEYIKQVK EGFRKVFQDG 600
  601 DGTGVRAFQK ASYKPAGKTG TAQTVYGGES DIGRNEKGER RECYNLTLAG YAPYDNPEVA 660
  661 FSVVVPWVMN DKSGINSDIG KEVLDAYFEL KNKRLTGETL QKDSSQEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle