YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|65317519, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTIQLYTM LSMIGMGAWI GASLDTYQRF LKRQERKRWL VFIHDILFWI VQALFVFYVL  60
   61 LLVNEAELRI YVFLALLCGF AAYQSLLKAI YMRLLNFRSN FCANNTLFCS NYKATHDKTC 120
  121 YYYSAAIYCI YIILISYTAF NWTCVMENGD LDITFHMESF FLACSIYCTL IWKLLPNRVK 180
  181 LFIMKHVGFL QYIAKLKGHI FQLWERIKKK LGGPRK

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.84
Transmembrane Helix	7	27	0.88
Cytoplasmic	28	39	0.90
Transmembrane Helix	40	62	0.92
Non-Cytoplasmic	63	69	0.82
Transmembrane Helix	70	91	0.90
Cytoplasmic	92	119	0.98
Transmembrane Helix	120	140	0.93
Non-Cytoplasmic	141	153	0.84
Transmembrane Helix	154	175	0.91
Cytoplasmic	176	216	0.97