YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21397554, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYIIVGIAG ILGALSRYYL GLTIHEFWHH TFPLATLLIN LAGCFLLAWL TTYIAKLNIL  60
   61 PSDVITGIGT GFIGSFTTFS TLSVETIQLI NHSEWGIAFL YVSCSILGGL IMSGLGYTLG 120
  121 DFLLKKHLTE GDHL

Type	Start	End	Confidence
Cytoplasmic	1	4	0.61
Transmembrane Helix	5	22	0.77
Non-Cytoplasmic	23	31	0.61
Transmembrane Helix	32	53	0.91
Cytoplasmic	54	63	0.65
Transmembrane Helix	64	84	0.87
Non-Cytoplasmic	85	96	0.73
Transmembrane Helix	97	119	0.94
Cytoplasmic	120	134	0.84