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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66768787, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTVLTRREL CKATGAAVAV LGGAPALSQA ADIAPLPAVA PDDALHLWYR EPANEWVQAL  60
   61 PVGNGRLGAM VWGGIAHERL QLNEDTLYAG GPYDATNPQA LAALPQVRAL IFAGRYAEAE 120
  121 QLADAKLLSR PLKQMPYQPL GDLLLDFDRA DGISEYRRQL DLDTAVATTT FRSGGAVHRR 180
  181 EVFVSAQSQC IVVRLSCDRP GGISLRVGID SPQSGEVTVE QGSLLFSGRN GSFAGIDGKL 240
  241 RFALRVLPQV KGGSVTAVRD RLRIQGADEV VLLLTAATSY QRFDAVEGDP LALTVASLQK 300
  301 AGKLSYAALL RAHLADHQRL FRRVAIDLGS SEAARLPTDE RVQRFAEGND PALAALYHQY 360
  361 GRYLLICSSR PGTQPANLQG IWNDLMQPPW ESKYTININT EMNYWPSEAN ALHECVEPLE 420
  421 AMLFDLARTG AHTARALYDA PGWVVHNNTD LWRQAGPIDG AQWSLWPMGG VWLLQQLWDR 480
  481 WDYGRDRAYL AKIYPLFKGA AEFFVATLVR DPGTGAMVTN PSMSPENQHP FGAAVCAGPT 540
  541 MDAQLLRDLF AQCIAMSKLL DVDAALAQQL ATLREQLPPN RIGKAGQLQE WQQDWDMQAP 600
  601 EIHHRHVSHL YALHPSSQIN LRDTPELAAA ARRSLEIRGD NATGWGIGWR LNLWARLADG 660
  661 EHAYRILQLL LSPERTYPNL FDAHPPFQID GNFGGTAGIT EMLLQSWGGS VFLLPALPKA 720
  721 WPRGSVRGLR VRGGASVDLE WDAGRLQQAR VHSDRGGRYQ LSYAGQTLDL QLGAGRTQQV 780
  781 GLNNNRLVKQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle