YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|188992257, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAASKSLA VALASAIALS ACATGGSYVQ RDQYGDQTQQ QNRTGRNALI GTAIGVAAGL  60
   61 LTGDSATERR QHAMIGAGIG ALSGAAVGQY QDRQERALRE RTANTGIDVQ RQGDNITLNL 120
  121 PDGITFDFGK SALKPQFYTA LNGVASTLRE YNQTMVEVVG HTDSVGSDAV NQRLSEERAN 180
  181 AVAQYLTAQG VQRERMETMG AGKRYPIADN STDAGRAQNR RVEIRLIPLR QEGAASTTGM 240
  241 R

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	241	0.98