YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21111431, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMELALASAI GVLTALAIYL LLRARSFDVI LGLTFLSYAT NLLIFAGGRL RSGQPPVLRD  60
   61 GISADLSQHT DPLPQALVLT AIVIAFAMTA VSLVLAIRSR SDNGSDHVDA HEDADTGEDT 120
  121 REARR

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.76
Transmembrane Helix	5	22	0.88
Cytoplasmic	23	28	0.76
Transmembrane Helix	29	48	0.88
Non-Cytoplasmic	49	75	0.87
Transmembrane Helix	76	97	0.93
Cytoplasmic	98	125	0.95