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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20907888, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDLFKGLFG KKSNELFIIL AVGLLFTFFA SYFGLFESIV LFVEEYNPRK LGGLLTLSVY  60
   61 LAFALGIFSL RRWMELENAL VLQEKTEESL KEKDKRYRAL FEHSNDAIII LNGEKVLDLN 120
  121 KKGREAFGLG ARELDNISIG SLLSEKDLPA VRDALKTTLE NGSACFEMKF RKQNGEVIDV 180
  181 EVSSSFLSLE EGEIQCVARD ITTRKKAEKN ERESRERLKK IIDNALCGIL LVDASTHEIV 240
  241 DANPAAVEAI GLPGHRLTGN VCHKFICPVE EGKCPITDFK QSVDKSERML LNGKGESFPV 300
  301 LKSVVPVKIG ENEYLIESFI DLSERKKTEE ELLQAKLAAE SANRAKSEFL TNMSHELRTP 360
  361 LTAIIGFSDV MLGGISGEFS EQNKKFLNNI ANSGKHLLTL INNILDLSKI EAGKMELEFE 420
  421 MFSVSEVFND TRAVTSALAL KKDISMKYNV DSEILVYADR VRFKQIIYNL VSNAIKFTPD 480
  481 RGSVIVSALK TEDSVRISVS DTGIGISEEN QKLLFQPFRQ IDASINRHYE GTGLGLALVK 540
  541 KFVNLHGGRV WAESEPGKGS TFEFELPLKC GITSETRINN PDASKKIASS PAEKTVPENH 600
  601 VSDKPAFEKP EREENIKPEA NNKSRLPEII EPSGDSGEKN LVMVVEDDEM AKELLTITLS 660
  661 EAGYRVVTVS SGREALLLAR ELKPSVITLD IMLPGVSGWD ILKNLKHDSA TSDIPILVIS 720
  721 MNDEKNCSIL WGAVDHLIKP VEKERLLSSL QKVKGAINAK SSPRVLIVDD EPTIVELFSS 780
  781 IIKEEGYEPV CAYGGKEAVD KIRNGHPDII ILDLMMPHFT GFDLIKVLKE NPETIDIPVI 840
  841 VCTAKELTFE EKDQLNRNVS YIMKKGNITR EVLLSVLQKV EDKKFKSKQT NS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle