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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21229203, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIDISKKVL IITLLIFTVL TASFTFTHNM QLSNFLELER ADTFENVERV QNAVATEQSY  60
   61 LDYIVQDWAC WDDTYQFIED KNPEYIRVDL QNQTLSGINV NVMIFVNNSG KVVYVKSVNT 120
  121 STAEEAPVPR KLLAMIEDGG LLTEGENDSI SGFVLLDEDP MFIACHPILT TKYEGPSRGT 180
  181 LIFGRYFDDA LLESFKKVTR SSLLMYRADE EMPQDFQNKI KNFSQNSDNI VVDPLNKNQI 240
  241 AGYFGLKDIK GDIALILRAD FPRELYLHGE RTLNYMYFFL LLTGLMTGVG VKFVLDKLFI 300
  301 SRLVEVDDFV TRVRSEKDLS QRLSLEDNDE LYRLSREING MLNEIYLAEQ ELKAQAREKK 360
  361 VLLDSLNELA VFVDTELKII WANKAALEYM NMGLEKAIGV CLKVAPGISG PLVEHLNLEE 420
  421 IFTTGEKKSG EYTAQDGRVW FAQAIPVPDE QGKIIGILQT CRDVTERKEA ERLLHEKQIA 480
  481 EIANRTKSEF LANMSHELRT PLNSIIGFSD LLYEKVYGEL NEKQARAVGN ISRSGKHLLN 540
  541 LINDILDLSK VEAGKMELDY KEFELAGKLN AIKSLLSPIA DRKNIEIDIE VDKGLTHIRA 600
  601 DEARFVQIMY NLMDNAIKFS HENGLVKVRA ERKGDLVEIT VKDKGIGIKE EDQCKLFKPF 660
  661 SQVDSFSSKT FQGTGLGLSL VKQIVNLHGG EVWFNSKIGE GSTFAFTVPI DGNNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle