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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21229201, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDISKKLLIV TFSIFALFTV LLITASHSIL LESFSDLEEQ DTAKNTGKIE QAIAWEIMSI  60
   61 DRTARDWAFW DDTYDFVNTL NPQYIESNLD GNTLYSLDLN LMLFVNKSGS LVYPMSVDLI 120
  121 NETVVPVPEG IKEGIDSGVL IAHNDTDYIH GVVLLDNGPM LVVCRPILTG PGKSPHAGTL 180
  181 IFGKYLDDSY RMFLENRTKT SLELYTLNQQ MPPDFQKAFN IIASGEKSPV IILGNERVAG 240
  241 YFALRNTIGE PVAIVRADYP RELYEQGEKT LYYIYIFLLI SGIATGAATK FSIDRLLVSR 300
  301 LITIDNFLRK VKRDKDTSKK LEMEGEDEIH RLSKGINDML FSIRLAEQEL RASEYEKKFI 360
  361 LDSLEEIVVL RDPEFNVRWA NQAALKNRDL LMIENKEKAL DIPVNDRKTP QELQLPGAPI 420
  421 WTDHEFTSPE GKTWLLRLKP ICGETGNIIA YLETGVEITE RKKYEIELFR AKQDAEVANY 480
  481 AKSEFLANMS HELRTPLNSI IGFSDLLHDK VYGELNARQL KAVGNISGSG KHLLNLINEI 540
  541 LDLSKVEAGG FELHYSTFWL ADVFAEVRDM LFPFAASKGI KLELEIEKDL PGIYGDRERI 600
  601 TQVLSNLMTN AVKFSNENSC VRVKASQNNN FIEVSVSDEG IGIAAEDHDK LFKPFSQIDS 660
  661 SSSRKYQGTG LGLALVKEIV QLHGGAVWFK SEVGKGSTFG FSIPLHV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle