YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21228006, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKQNLVYLA SFLVILIAIL IFAPRGGDRP SGFTNVSVEE AKELLDEEDV FLLDVRTPPE  60
   61 FNSFHIEGAT LIPVTNSSGS SLSSDKLLEA RVDEVPENKK ILVYCRSGHR SISASKILVN 120
  121 AGYSQVYNME GGINAWTGAG YPVVSSE

Type	Start	End	Confidence
Cytoplasmic	1	5	0.39
Transmembrane Helix	6	27	0.49
Non-Cytoplasmic	28	147	0.84